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Accueil > Research > Research teams > Computational Molecular Systems Biology > Tools

Computational Molecular Systems Biology

LigASite

LigASite : « LIGand Attachment SITE », database of binding sites

LigASite is a gold-standard dataset of biologically relevant binding sites in protein structures. It consists of proteins with one unbound structure and at least one structure of the protein-ligand complex. Both a redundant and a non-redundant (sequence identity lower than 25%) version is available. Quaternary structures proposed by PISA are used for all structures in the dataset.

Access to the web server here.

Reference :
Dessailly BH, Lensink MF, Wodak SJ
LigASite : a database of biologically relevant binding sites in proteins with known apo-structures
Nucleic Acids Res. 2008 ;36(Database issue):D667-73.