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Accueil > Research > Research teams > Computational Molecular Systems Biology > Publications

Computational Molecular Systems Biology

2015

Brysbaert G, Lensink MF, Blossey R. Regulatory motifs on ISWI chromatin
remodelers : molecular mechanisms and kinetic proofreading. J Phys Condens Matter.
2015 Feb 18 ;27(6):064108. doi : 10.1088/0953-8984/27/6/064108. Epub 2015 Jan 7.
PubMed PMID : 25563573.

Dupré E, Lesne E, Guérin J, Lensink MF, Verger A, de Ruyck J, Brysbaert G,
Vezin H, Locht C, Antoine R, Jacob-Dubuisson F. Signal transduction by BvgS
sensor kinase. Binding of modulator nicotinate affects the conformation and dynamics of the entire plasmic moiety. J Biol Chem. 2015 Oct 30 ;290(44):26473. doi : 10.1074/jbc.A115.655720. PubMed PMID : 26519485 ; PubMed Central PMCID : PMC4646306.

Development of heptylmannoside−based glycoconjugate antiadhesive compounds against adherent−invasive Escherichia coli bacteria associated with Crohn’s disease. Sivignon A, Yan X, Dorta DA, Bonnet R, Bouckaert J, Fleury E, Bernard J, Gouin S, Darfeuille−Michaud A, Barnich N. mBio 2015 6(6):e01298−15.

Inhibition profiles of mono- and polyvalent FimH antagonists against 10 different Escherichia coli strains. T Chalopin · Y Brissonnet · A Sivignon · D Deniaud · L Cremet · N Barnich · J Bouckaert · SG Gouin · Org. Biomol. Chem. 2015 13(46):11369-11375.

Highly effective photodynamic inactivation of E. coli using gold nanorods/SiO2 core–shell nanostructures with embedded verteporfin. Kostiantyn Turcheniuk, Volodymyr Turcheniuk, Charles-Henri Hage, Tetiana Dumych, Rostyslav Bilyy, Julie Bouckaert, Laurent Héliot, Vladimir Zaitsev, Rabah Boukherroub and Sabine Szunerits. Chem. Commun. 2015, 51, 16365-16368.

Candida albicans β-1,2 mannosyltransferase Bmt3 elongates the cell-wall phosphopeptidomannan. Ghenima Sfihi-Loualia*, Thomas Hurtaux*, Emeline Fabre*, Chantal Fradin, Anaïs Mée, Marilyne Pourcelot, Emmanuel Maes, Julie Bouckaert, Jean-Maurice Mallet, Daniel Poulain, Florence Delplace* and Yann Guérardel*. Glycobiology 2015 doi : 10.1093/glycob/cwv094

Surface Plasmon Resonance (SPR) for the evaluation of shear force dependent bacterial adhesion. Oleksandr Zagorodko , Julie Bouckaert*, Tetiana Dumych, Rostyslav Bilyy, Iban Larroulet, Aritz Yanguas Serrano, Sebastien G. Gouin, Stefan-Ovidiu Dima, Rabah Boukherroub, Sabine Szunerits * Biosensors (Basel) ; 2015 5(2):276-287.

Glycopolymers as anti-adhesives of E. coli-strains inducing inflammatory bowel diseases. Xibo Yan ; Adeline Sivignon, Nao Yamakawa, Agnes Crepet, Christophe Travelet, Redouane Borsali, Tetiana Dumych, Zhaoli Li, Rostyslav Bilyy, David Deniaud, Etienne Fleury, Nicolas Barnich, Arlette Darfeuille-Michaud, Sébastien Gouin, Julie Bouckaert, Julien Bernard. Biomacromolecules 2015, 16 (6), pp 1827–1836

Plasmonic photothermal destruction of uropathogenic E. coli with reduced graphene oxide and core/shell nanocomposites of gold nanorods/reduced graphene oxide. Kostiantyn Turcheniuk, Charles-Henri Hage, Jolanda Spadavecchia, Aritz Yanguas Serrano, Iban Larroulet, Amaia Pesquera, Amaia Zurutuza, Mariano Gonzalez Pisfil, Laurent Héliot, Julie Boukaert, Rabah Boukherroub, Sabine Szunerits Journal of Materials Chemistry B 2015 3 (3), 375-386.

Buyukdagli S, Blossey R, Ala-Nissila T. Ionic current inversion in
pressure-driven polymer translocation through nanopores. Phys Rev Lett. 2015 Feb
27 ;114(8):088303. Epub 2015 Feb 26. PubMed PMID : 25768784.

Surface Plasmon Resonance (SPR) for the evaluation of shear force dependent bacterial adhesion. Oleksandr Zagorodko , Julie Bouckaert*, Tetiana Dumych, Rostyslav Bilyy, Iban Larroulet, Aritz Yanguas Serrano, Sebastien G. Gouin, Stefan-Ovidiu Dima, Rabah Boukherroub, Sabine Szunerits * Biosensors (Basel) 2015 May 26 ;5(2):276-287.

Glycopolymers as Anti-adhesives of E. coli-strains Inducing Inflammatory Bowel Diseases Xibo Yan ; Adeline Sivignon, Nao Yamakawa, Agnes Crepet, Christophe Travelet, Redouane Borsali, Tetiana Dumych, Zhaoli Li, Rostyslav Bilyy, David Deniaud, Etienne Fleury, Nicolas Barnich, Arlette Darfeuille-Michaud, Sébastien Gouin, Julie Bouckaert, Julien Bernard. Biomacromolecules 2015, 16 (6), pp 1827–1836 IF 5.750

Plasmonic photothermal destruction of uropathogenic E. coli with reduced graphene oxide and core/shell nanocomposites of gold nanorods/reduced graphene oxide. Kostiantyn Turcheniuk, Charles-Henri Hage, Jolanda Spadavecchia, Aritz Yanguas Serrano, Iban Larroulet, Amaia Pesquera, Amaia Zurutuza, Mariano Gonzalez Pisfil, Laurent Héliot, Julie Boukaert, Rabah Boukherroub, Sabine Szunerits Journal of Materials Chemistry B 3 (3), 375-386.

Brysbaert G, Lensink MF, Blossey R. Regulatory motifs on ISWI chromatin remodelers : molecular mechanisms and kinetic proofreading. J Phys Condens Matter., 2015, 27 (6) : 064108

Lensink MF. Membrane-associated proteins and peptides. Methods Mol Biol., 2015, 1215 : 109-24

Buyukdagli S, Blossey R, Ala-Nissila T. Ionic current inversion in pressure-driven polymer translocation through nanopores. Phys Rev Lett., 2015, 114 (8) : 088303

Dupré E, Herrou J, Lensink MF, Wintjens R, Vagin A, Lebedev A, Crosson S, Villeret V, Locht C, Antoine R, Jacob-Dubuisson F. Virulence Regulation with Venus Flytrap Domains : Structure and Function of the Periplasmic Moiety of the Sensor-Kinase BvgS. PLoS Pathog., 2015, 11 (3) : e1004700